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  5. Lfl_g19695

Lfl_g19695 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000000 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g19695
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT2G47110 UBQ6 ubiquitin 6 0.01 OrthoFinder output from all 39 species
AT3G62250 UBQ5 ubiquitin 5 0.01 OrthoFinder output from all 39 species
Adi_g075014 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Ceric.08G035500.1 Ceric.08G035500 component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ceric.27G040600.1 Ceric.27G040600 component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Gb_15027 UBQ6 component RPS27a of SSU proteome 0.01 OrthoFinder output from all 39 species
Gb_41257 No alias component RPL40 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Lfl_g07710 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g09227 No alias UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g11347 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g17099 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Lfl_g17105 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g24358 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g33977 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g34247 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g34937 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Lfl_g35252 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g35542 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g39807 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Lfl_g39809 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 39 species
MA_7609762g0010 No alias No annotation 0.01 OrthoFinder output from all 39 species
Mp7g12760.1 UBQ6 component RPS27a of SSU proteome 0.01 OrthoFinder output from all 39 species
Mp8g00780.1 No alias component RPL40 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Ore_g23785 RUB1, ATRUB1, NEDD8 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Pnu_g18977 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Pp3c12_5640V3.1 UBQ6, Pp3c12_5640 ubiquitin 6 0.01 OrthoFinder output from all 39 species
Pp3c12_5760V3.1 UBQ6, Pp3c12_5760 ubiquitin 6 0.01 OrthoFinder output from all 39 species
Pp3c20_23170V3.1 Pp3c20_23170 ubiquitin extension protein 1 0.01 OrthoFinder output from all 39 species
Pp3c3_25480V3.1 Pp3c3_25480 ubiquitin extension protein 1 0.01 OrthoFinder output from all 39 species
Pp3c4_11930V3.1 Pp3c4_11930 Ubiquitin supergroup;Ribosomal protein L40e 0.01 OrthoFinder output from all 39 species
Pp3c4_19000V3.1 UBQ6, Pp3c4_19000 ubiquitin 6 0.01 OrthoFinder output from all 39 species
Pp3c8_14230V3.1 UBQ6, Pp3c8_14230 ubiquitin 6 0.01 OrthoFinder output from all 39 species
Ppi_g34926 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g52958 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Sam_g20114 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 73 138
IPR000626 Ubiquitin-like_dom 1 68
No external refs found!