AMTR_s00025p00186360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.225

No description available


Gene families : OG_01_0000031 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000031_tree ,
OG_02_0015120 (LandPlants) Phylogenetic Tree(s): OG_02_0015120_tree ,
OG_03_0014747 (SeedPlants) Phylogenetic Tree(s): OG_03_0014747_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00186360
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AT4G14640 AtCML8, CAM8 calmodulin 8 0.05 Archaeplastida
AT4G37010 CEN2 centrin 2 0.03 Archaeplastida
GSVIVT01003796001 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01004914001 No alias Probable calcium-binding protein CML13 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01021797001 No alias Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os05g24780.1 No alias Probable calcium-binding protein CML21 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os07g12240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g48340.1 No alias Probable calcium-binding protein CML24 OS=Oryza sativa... 0.02 Archaeplastida
MA_103558g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.02 Archaeplastida
MA_254754g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_269415g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_27386g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.05 Archaeplastida
MA_393053g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_66990g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9257733g0010 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.03 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c17_17270V3.1 No alias centrin2 0.02 Archaeplastida
Pp3c5_10970V3.1 No alias calmodulin like 23 0.02 Archaeplastida
Pp3c6_1770V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Smo81875 No alias Calmodulin-2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo83841 No alias Calmodulin-5/6/7/8 OS=Solanum tuberosum 0.03 Archaeplastida
Smo96597 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g063350.1.1 No alias Probable calcium-binding protein CML18 OS=Oryza sativa... 0.02 Archaeplastida
Solyc12g009630.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_66990g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_9257733g0010 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.02 LandPlants
MA_66990g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_9257733g0010 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 124 186
No external refs found!