AMTR_s00025p00182570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.221

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP3 component


Gene families : OG_01_0003127 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003127_tree ,
OG_02_0002232 (LandPlants) Phylogenetic Tree(s): OG_02_0002232_tree ,
OG_03_0002853 (SeedPlants) Phylogenetic Tree(s): OG_03_0002853_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00182570
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT4G25890 No alias 60S acidic ribosomal protein family 0.17 Archaeplastida
AT5G57290 No alias 60S acidic ribosomal protein family 0.17 Archaeplastida
GSVIVT01010910001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
Gb_31564 No alias component RPP3 of LSU proteome component 0.12 Archaeplastida
LOC_Os01g13080.1 No alias component RPP3 of LSU proteome component 0.07 Archaeplastida
LOC_Os06g48780.1 No alias component RPP3 of LSU proteome component 0.08 Archaeplastida
MA_10431312g0020 No alias component RPP3 of LSU proteome component. component... 0.17 Archaeplastida
MA_468112g0010 No alias component RPP3 of LSU proteome component 0.02 Archaeplastida
Mp3g07010.1 No alias component RPP3 of LSU proteome component 0.13 Archaeplastida
Pp3c21_16160V3.1 No alias 60S acidic ribosomal protein family 0.14 Archaeplastida
Pp3c22_2920V3.1 No alias 60S acidic ribosomal protein family 0.15 Archaeplastida
Smo105823 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Solyc07g009330.4.1 No alias component RPP3 of LSU proteome component 0.14 Archaeplastida
Zm00001e013180_P001 No alias component RPP3 of LSU proteome component 0.07 Archaeplastida
AT4G25890 No alias 60S acidic ribosomal protein family 0.16 LandPlants
AT5G57290 No alias 60S acidic ribosomal protein family 0.16 LandPlants
GSVIVT01010910001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 LandPlants
Gb_31564 No alias component RPP3 of LSU proteome component 0.12 LandPlants
LOC_Os01g13080.1 No alias component RPP3 of LSU proteome component 0.06 LandPlants
LOC_Os06g48780.1 No alias component RPP3 of LSU proteome component 0.08 LandPlants
MA_10431312g0020 No alias component RPP3 of LSU proteome component. component... 0.15 LandPlants
Mp3g07010.1 No alias component RPP3 of LSU proteome component 0.13 LandPlants
Pp3c21_16160V3.1 No alias 60S acidic ribosomal protein family 0.13 LandPlants
Pp3c22_2920V3.1 No alias 60S acidic ribosomal protein family 0.15 LandPlants
Smo105823 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 LandPlants
Solyc07g009330.4.1 No alias component RPP3 of LSU proteome component 0.12 LandPlants
Zm00001e013180_P001 No alias component RPP3 of LSU proteome component 0.07 LandPlants
AT4G25890 No alias 60S acidic ribosomal protein family 0.16 SeedPlants
AT5G57290 No alias 60S acidic ribosomal protein family 0.16 SeedPlants
GSVIVT01010910001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 SeedPlants
Gb_31564 No alias component RPP3 of LSU proteome component 0.12 SeedPlants
LOC_Os01g13080.1 No alias component RPP3 of LSU proteome component 0.06 SeedPlants
LOC_Os06g48780.1 No alias component RPP3 of LSU proteome component 0.08 SeedPlants
MA_10431312g0020 No alias component RPP3 of LSU proteome component. component... 0.15 SeedPlants
MA_468112g0010 No alias component RPP3 of LSU proteome component 0.01 SeedPlants
Solyc07g009330.4.1 No alias component RPP3 of LSU proteome component 0.12 SeedPlants
Zm00001e013180_P001 No alias component RPP3 of LSU proteome component 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!