Dde_g37952


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g37952
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G35030 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G02750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004274 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004372 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014778 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g033266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28165 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g32785 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g09497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14740 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene04772.t1 CRR22, Aspi01Gene04772 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34782.t1 Aspi01Gene34782 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0081.g038550 EMB2758 not classified & original description: CDS=1-1851 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038617 OTP86 not classified & original description: CDS=1-2295 0.06 OrthoFinder output from all 47 species
Azfi_s0104.g044768 EMB2758 not classified & original description: CDS=1-1815 0.04 OrthoFinder output from all 47 species
Azfi_s0544.g076393 No alias not classified & original description: CDS=1-927 0.05 OrthoFinder output from all 47 species
Azfi_s2932.g113765 CRR22 not classified & original description: CDS=1-1710 0.05 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30006 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g72789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.05 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.05 OrthoFinder output from all 47 species
Cre01.g025950 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Dcu_g08450 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g46775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
GSVIVT01009574001 OSB1 Cell cycle.organelle machineries.DNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.07 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Gb_06115 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
LOC_Os01g46230.1 MEF1, LOC_Os01g46230 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
LOC_Os01g60000.1 SLO1, LOC_Os01g60000 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g74600.1 CRR22, LOC_Os01g74600 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g56400.1 LOC_Os03g56400 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
LOC_Os04g09530.1 LOC_Os04g09530 RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species
LOC_Os04g35650.1 LOC_Os04g35650 Pentatricopeptide repeat-containing protein At3g26540... 0.04 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.04 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.04 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os11g37330.2 LOI1, MEF11,... RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
Len_g03252 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g14930 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54965 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07842 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429043g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
MA_140208g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_3612g0010 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
MA_43727g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_474261g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.07 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Nbi_g10571 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38813 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g21989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29294 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20514 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30095 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33734 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004138 No alias not classified & original description: CDS=1-2646 0.07 OrthoFinder output from all 47 species
Smo399 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Smo98955 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Spa_g14323 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26279 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g51293 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55537 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.05 OrthoFinder output from all 47 species
Zm00001e001918_P001 EMB2758, Zm00001e001918 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e023504_P001 CRR22, Zm00001e023504 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.05 OrthoFinder output from all 47 species
Zm00001e032242_P001 Zm00001e032242 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Zm00001e032485_P001 EMB2744, Zm00001e032485 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Zm00001e033171_P001 Zm00001e033171 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Zm00001e036301_P001 Zm00001e036301 Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Zm00001e038850_P001 EMB2758, Zm00001e038850 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e040418_P001 Zm00001e040418 Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
Zm00001e040920_P001 Zm00001e040920 Pentatricopeptide repeat-containing protein At3g26540... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 115 142
IPR002885 Pentatricopeptide_repeat 627 652
IPR002885 Pentatricopeptide_repeat 520 567
IPR002885 Pentatricopeptide_repeat 316 364
IPR002885 Pentatricopeptide_repeat 418 464
IPR002885 Pentatricopeptide_repeat 214 261
No external refs found!