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Aliases : VAC1, ECB2, ATECB2
Description : ssDNA-binding protein *(OSB) & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00220350 | OTP85,... | Pentatricopeptide repeat-containing protein At2g02980,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00088p00046850 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G01030 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G19191 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G25270 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036757 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g23769 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05980 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g10709 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g36880 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene01267.t1 | CRR2, Aspi01Gene01267 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18568.t1 | Aspi01Gene18568 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene57232.t1 | Aspi01Gene57232 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65777.t1 | Aspi01Gene65777 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05154 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05792 | REME1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G011700.1 | Ceric.13G011700 | not classified & original description: pacid=50636754... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021035.24 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g16808 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03091 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33439 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g52475.1 | LOC_Os03g52475 | Pentatricopeptide repeat-containing protein At3g28660... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g14130.1 | LOC_Os04g14130 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g24680.1 | LOC_Os09g24680 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07376 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07783 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07796 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g25864 | OSB4 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g33282 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g23638 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g02370 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g06449 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32582 | EMB2261 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g34877 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g13532 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63739 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g48074 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006567 | No alias | not classified & original description: CDS=1-2706 | 0.06 | OrthoFinder output from all 47 species | |
| Smo173139 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g096610.2.1 | Solyc03g096610 | Pentatricopeptide repeat-containing protein At1g33350... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114010.3.1 | Solyc03g114010 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g048900.1.1 | Solyc06g048900 | Pentatricopeptide repeat-containing protein At2g40720... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g009220.2.1 | Solyc07g009220 | Pentatricopeptide repeat-containing protein At2g34400... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g005090.3.1 | Solyc10g005090 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 353 | 378 |
| IPR002885 | Pentatricopeptide_repeat | 555 | 576 |
| IPR046848 | E_motif | 600 | 655 |
| IPR002885 | Pentatricopeptide_repeat | 381 | 426 |
| IPR002885 | Pentatricopeptide_repeat | 276 | 323 |
| IPR002885 | Pentatricopeptide_repeat | 481 | 528 |
| IPR002885 | Pentatricopeptide_repeat | 174 | 222 |
| No external refs found! |