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  5. Lfl_g19210

Lfl_g19210


Description : DNA exonuclease *(NEN) & original description: none


Gene families : OG0003937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g19210
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT5G61390 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.05 OrthoFinder output from all 47 species
Aop_g08622 No alias DNA exonuclease *(NEN) & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0006.g010101 No alias DNA exonuclease *(NEN) & original description: CDS=18-2396 0.03 OrthoFinder output from all 47 species
Ceric.32G067400.1 Ceric.32G067400 DNA exonuclease *(NEN) & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g14200 No alias DNA exonuclease *(NEN) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os10g26720.1 LOC_Os10g26720 Protein NEN3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g16196 No alias DNA exonuclease *(NEN) & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g05420 No alias DNA exonuclease *(NEN) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42214 No alias DNA exonuclease *(NEN) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g01831 No alias DNA exonuclease *(NEN) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11769 No alias DNA exonuclease *(NEN) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g30368 No alias DNA exonuclease *(NEN) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0240.g026602 No alias monosaccharide transporter *(AZT) & original... 0.03 OrthoFinder output from all 47 species
Smo89701 No alias Protein NEN4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g054720.4.1 Solyc04g054720 Protein NEN4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g04824 No alias DNA exonuclease *(NEN) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012819_P002 Zm00001e012819 Protein NEN1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e029716_P001 Zm00001e029716 Protein NEN1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013520 Exonuclease_RNaseT/DNA_pol3 69 228
No external refs found!