AMTR_s00025p00139140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.145

Description : Polyamine metabolism.spermidine/spermine.synthesis.S-adenosyl methionine decarboxylase


Gene families : OG_01_0001075 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001075_tree ,
OG_02_0000749 (LandPlants) Phylogenetic Tree(s): OG_02_0000749_tree ,
OG_03_0000673 (SeedPlants) Phylogenetic Tree(s): OG_03_0000673_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00139140
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT5G15950 No alias Adenosylmethionine decarboxylase family protein 0.04 Archaeplastida
AT5G18930 SAMDC4, BUD2 Adenosylmethionine decarboxylase family protein 0.05 Archaeplastida
GSVIVT01017856001 No alias Polyamine... 0.06 Archaeplastida
MA_10434945g0010 No alias S-adenosyl methionine decarboxylase 0.04 Archaeplastida
MA_726162g0010 No alias S-adenosyl methionine decarboxylase 0.04 Archaeplastida
MA_9879049g0010 No alias S-adenosyl methionine decarboxylase 0.04 Archaeplastida
Pp3c23_21570V3.1 No alias Adenosylmethionine decarboxylase family protein 0.02 Archaeplastida
Solyc01g080380.4.1 No alias S-adenosyl methionine decarboxylase 0.02 Archaeplastida
Zm00001e034199_P001 No alias S-adenosyl methionine decarboxylase 0.03 Archaeplastida
Zm00001e034200_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AT5G15950 No alias Adenosylmethionine decarboxylase family protein 0.04 LandPlants
AT5G18930 SAMDC4, BUD2 Adenosylmethionine decarboxylase family protein 0.05 LandPlants
GSVIVT01017856001 No alias Polyamine... 0.04 LandPlants
MA_10434945g0010 No alias S-adenosyl methionine decarboxylase 0.02 LandPlants
MA_726162g0010 No alias S-adenosyl methionine decarboxylase 0.02 LandPlants
MA_9879049g0010 No alias S-adenosyl methionine decarboxylase 0.02 LandPlants
Pp3c23_21570V3.1 No alias Adenosylmethionine decarboxylase family protein 0.02 LandPlants
Zm00001e034199_P001 No alias S-adenosyl methionine decarboxylase 0.03 LandPlants
Zm00001e034200_P001 No alias no hits & (original description: none) 0.03 LandPlants
GSVIVT01017856001 No alias Polyamine... 0.04 SeedPlants
MA_10434945g0010 No alias S-adenosyl methionine decarboxylase 0.02 SeedPlants
MA_726162g0010 No alias S-adenosyl methionine decarboxylase 0.02 SeedPlants
MA_9879049g0010 No alias S-adenosyl methionine decarboxylase 0.02 SeedPlants
Zm00001e034199_P001 No alias S-adenosyl methionine decarboxylase 0.03 SeedPlants
Zm00001e034200_P001 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEA Interproscan
BP GO:0006597 spermine biosynthetic process IEA Interproscan
BP GO:0008295 spermidine biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 4 318
No external refs found!