1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g30103

Dde_g30103 (SOC1, AGL20, ATSOC1)


Aliases : SOC1, AGL20, ATSOC1

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g30103
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00181740 AGL7, AP1,... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AT1G77950 AGL67 AGAMOUS-like 67 0.03 OrthoFinder output from all 47 species
AT2G45650 AGL6 AGAMOUS-like 6 0.04 OrthoFinder output from all 47 species
Aspi01Gene06309.t1 Aspi01Gene06309 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0028.g024032 ANR1, AGL44 MADS/AGL-type transcription factor & original... 0.08 OrthoFinder output from all 47 species
Ceric.05G029400.1 AGL16, Ceric.05G029400 MADS/AGL-type transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.08G048300.1 AGL42, Ceric.08G048300 MADS/AGL-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ceric.33G065500.1 AGL13, Ceric.33G065500 MADS/AGL-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dde_g22674 ANR1, AGL44 MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01006592001 AGL61, DIA RNA biosynthesis.transcriptional activation.MADS box... 0.06 OrthoFinder output from all 47 species
GSVIVT01008140001 AGL8, FUL RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01008980001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01015649001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01037022001 AGL62 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66030.1 PI, LOC_Os01g66030 transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
LOC_Os06g06750.1 AGL9, SEP3,... transcription factor (MADS/AGL) 0.06 OrthoFinder output from all 47 species
LOC_Os10g39130.1 GL19, AGL19,... transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Lfl_g08300 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_10432817g0010 SVP, AGL22 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
MA_19007g0010 AGL3, SEP4 transcription factor (MADS/AGL) 0.06 OrthoFinder output from all 47 species
MA_45349g0010 AGL9, SEP3 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Msp_g21617 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23410 AGL13 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g05105 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22364 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g065730.2.1 AGL8, FUL, Solyc02g065730 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc05g015730.1.1 FLC, AGL25, FLF,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc05g056620.2.1 AGL7, AP1, Solyc05g056620 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc11g069770.2.1 AGL29, Solyc11g069770 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Spa_g12045 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g54311 AGL9, SEP3 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000167_P005 SOC1, AGL20,... transcription factor (MADS/AGL) 0.09 OrthoFinder output from all 47 species
Zm00001e027031_P001 PI, Zm00001e027031 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR002487 TF_Kbox 108 193
IPR002100 TF_MADSbox 33 80
No external refs found!