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  5. Dde_g29444

Dde_g29444 (ATEXPA4, ATEXP4,...)


Aliases : ATEXPA4, ATEXP4, EXPA4, ATHEXP ALPHA 1.6

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g29444

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
AT5G05290 EXPA2, ATHEXP... expansin A2 0.03 OrthoFinder output from all 47 species
Aev_g37610 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12167 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32812 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07936 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52233.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15317 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G037600.1 ATEXPA3, EXP3,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g15716 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37896 EXP15, ATEXPA15,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14223 EXPB3, ATEXPB3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01030375001 EXPB3, ATEXPB3,... Cell wall.cell wall proteins.expansins.beta-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01035233001 ATEXP13,... Expansin-A13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_20678 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_29322 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os01g14660.1 ATHEXP ALPHA... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g06050.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g31480.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os04g46650.1 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os06g01920.1 ATEXP7, EXPA7,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os06g41700.1 ATEXPA20,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g30340.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g40730.1 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g22081 ATEXPA10,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
MA_30127g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_36587g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Pir_g44684 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01997 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c21_1850V3.1 ATEXPA10,... expansin A1 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006211 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=682-1482 0.02 OrthoFinder output from all 47 species
Sam_g06188 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Smo95369 EXP5, ATHEXP... Expansin-A10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g081210.3.1 ATEXP13,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc02g088100.3.1 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Spa_g03664 EXP15, ATEXPA15,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15584 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15585 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002335_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e014247_P001 ATHEXP ALPHA... Expansin-A23 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e015337_P001 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e019433_P001 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e037885_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004506 squalene monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 226 302
IPR009009 RlpA-like_DPBB 128 215
No external refs found!