Dde_g29430

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g29430
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
AT2G36710	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
Aev_g10289	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g008131	No alias	pectin methylesterase & original description: CDS=1-870	0.03	OrthoFinder output from all 47 species
Cba_g11546	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.37G019300.1	Ceric.37G019300	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Nbi_g03614	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010557	No alias	pectin methylesterase & original description: CDS=267-1394	0.02	OrthoFinder output from all 47 species
Sam_g27684	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g065350.2.1	QRT1, Solyc07g065350	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Spa_g29457	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g14241	No alias	pecTin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008184	glycogen phosphorylase activity	IEP	HCCA
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	127	413

External Links

No external refs found!