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  5. Dde_g28524

Dde_g28524 (AGO1)


Aliases : AGO1

Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Dde_g28524

Target Alias Description ECC score Gene Family Method Actions
Aop_g10666 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47903.t1 AGO1, Aspi01Gene47903 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68511.t1 AGO1, Aspi01Gene68511 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Cba_g25204 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42950 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25176 No alias siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032473 Argonaute_Mid_dom 703 780
IPR032474 Argonaute_N 312 445
IPR003165 Piwi 795 1114
IPR003100 PAZ_dom 511 636
IPR032472 ArgoL2 646 692
IPR014811 ArgoL1 455 505
No external refs found!