Lfl_g18579 (RPL23AB)

Aliases : RPL23AB

Description : component *(uL23) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001401_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g18579
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AT2G39460	RPL23A, RPL23AA, ATRPL23A	ribosomal protein L23AA	0.03	OrthoFinder output from all 47 species
AT3G55280	RPL23AB	ribosomal protein L23AB	0.02	OrthoFinder output from all 47 species
Adi_g005345	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Als_g12005	RPL23A, RPL23AA, ATRPL23A	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g18428	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g19896	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000037.39	RPL23AB	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre06.g282500	RPL23A, RPL23AA, ATRPL23A	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Ehy_g04260	RPL23A, RPL23AA, ATRPL23A	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01025606001	No alias	60S ribosomal protein L23a-1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_38537	RPL23AB	component RPL23a of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os04g42270.2	RPL23AB, LOC_Os04g42270	component RPL23a of LSU proteome component	0.02	OrthoFinder output from all 47 species
Len_g05701	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
MA_10430928g0010	RPL23AB	component RPL23a of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp2g00570.1	RPL23AB	component RPL23a of LSU proteome component	0.03	OrthoFinder output from all 47 species
Nbi_g12753	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ore_g10109	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g06153	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c12_19360V3.1	RPL23AB, Pp3c12_19360	ribosomal protein L23AB	0.02	OrthoFinder output from all 47 species
Pp3c13_15920V3.1	RPL23AB, Pp3c13_15920	ribosomal protein L23AB	0.02	OrthoFinder output from all 47 species
Pp3c4_8620V3.1	RPL23AB, Pp3c4_8620	ribosomal protein L23AB	0.02	OrthoFinder output from all 47 species
Sam_g00769	No alias	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g06116	No alias	component *(uL23) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g06117	No alias	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Smo271663	RPL23AB	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Solyc09g005720.3.1	RPL23AB, Solyc09g005720	component RPL23a of LSU proteome component	0.02	OrthoFinder output from all 47 species
Solyc10g084610.3.1	RPL23AB, Solyc10g084610	component RPL23a of LSU proteome component	0.02	OrthoFinder output from all 47 species
Spa_g01808	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g10914	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Spa_g25289	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Tin_g03678	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e041164_P001	RPL23A, RPL23AA,...	component RPL23a of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006788	heme oxidation	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0042168	heme metabolic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005633	Ribosomal_L23/L25_N	12	62
IPR013025	Ribosomal_L25/23	71	136

External Links

No external refs found!

Lfl_g18579 (RPL23AB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation