Dde_g27296 (RAB28, ATRAB28)


Aliases : RAB28, ATRAB28

Description : not classified & original description: none


Gene families : OG0003000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g27296
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Ala_g37832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G023800.1 RAB28, ATRAB28,... not classified & original description: pacid=50600510... 0.03 OrthoFinder output from all 47 species
Dcu_g15808 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55933 RAB28, ATRAB28 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000449_P001 Zm00001e000449 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 OrthoFinder output from all 47 species
Zm00001e005665_P002 Zm00001e005665 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 OrthoFinder output from all 47 species
Zm00001e005666_P001 Zm00001e005666 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR007011 LEA_SMP_dom 85 132
IPR007011 LEA_SMP_dom 143 200
No external refs found!