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  5. AMTR_s00025p00115820

AMTR_s00025p00115820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.105

Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor


Gene families : OG_01_0001561 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001561_tree ,
OG_02_0005338 (LandPlants) Phylogenetic Tree(s): OG_02_0005338_tree ,
OG_03_0006935 (SeedPlants) Phylogenetic Tree(s): OG_03_0006935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00115820
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT4G02930 No alias GTP binding Elongation factor Tu family protein 0.05 Archaeplastida
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Gb_17545 No alias EF-Tu translation elongation factor 0.05 Archaeplastida
Gb_29040 No alias EF-Tu translation elongation factor 0.02 Archaeplastida
LOC_Os03g63410.1 No alias EF-Tu translation elongation factor 0.05 Archaeplastida
MA_58335g0010 No alias EF-Tu translation elongation factor 0.07 Archaeplastida
Mp1g03870.1 No alias EF-Tu translation elongation factor 0.02 Archaeplastida
Mp1g14750.1 No alias EF-Tu translation elongation factor 0.02 Archaeplastida
Pp3c20_17410V3.1 No alias GTP binding Elongation factor Tu family protein 0.02 Archaeplastida
Pp3c21_1500V3.1 No alias GTP binding Elongation factor Tu family protein 0.02 Archaeplastida
Smo153081 No alias Protein biosynthesis.organelle translation... 0.03 Archaeplastida
Solyc09g073000.3.1 No alias EF-Tu translation elongation factor 0.03 Archaeplastida
Zm00001e006373_P001 No alias EF-Tu translation elongation factor 0.05 Archaeplastida
Zm00001e011649_P001 No alias EF-Tu translation elongation factor 0.07 Archaeplastida
AT4G02930 No alias GTP binding Elongation factor Tu family protein 0.05 LandPlants
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.04 LandPlants
Gb_17545 No alias EF-Tu translation elongation factor 0.04 LandPlants
LOC_Os03g63410.1 No alias EF-Tu translation elongation factor 0.05 LandPlants
MA_58335g0010 No alias EF-Tu translation elongation factor 0.07 LandPlants
Mp1g14750.1 No alias EF-Tu translation elongation factor 0.02 LandPlants
Pp3c20_17410V3.1 No alias GTP binding Elongation factor Tu family protein 0.02 LandPlants
Pp3c21_1500V3.1 No alias GTP binding Elongation factor Tu family protein 0.02 LandPlants
Smo153081 No alias Protein biosynthesis.organelle translation... 0.02 LandPlants
Solyc09g073000.3.1 No alias EF-Tu translation elongation factor 0.03 LandPlants
Zm00001e006373_P001 No alias EF-Tu translation elongation factor 0.05 LandPlants
Zm00001e011649_P001 No alias EF-Tu translation elongation factor 0.07 LandPlants
AT4G02930 No alias GTP binding Elongation factor Tu family protein 0.05 SeedPlants
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.04 SeedPlants
Gb_17545 No alias EF-Tu translation elongation factor 0.04 SeedPlants
LOC_Os03g63410.1 No alias EF-Tu translation elongation factor 0.05 SeedPlants
MA_58335g0010 No alias EF-Tu translation elongation factor 0.07 SeedPlants
Solyc06g008940.4.1 No alias EF-Tu translation elongation factor 0.02 SeedPlants
Solyc09g073000.3.1 No alias EF-Tu translation elongation factor 0.03 SeedPlants
Zm00001e006373_P001 No alias EF-Tu translation elongation factor 0.05 SeedPlants
Zm00001e011649_P001 No alias EF-Tu translation elongation factor 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 313 384
IPR004160 Transl_elong_EFTu/EF1A_C 389 482
IPR000795 T_Tr_GTP-bd_dom 96 289
No external refs found!