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  5. Dde_g26450

Dde_g26450 (NUP96, PRE, SAR3, MOS3)


Aliases : NUP96, PRE, SAR3, MOS3

Description : nucleoporin of nuclear pore complex *(NUP98) & original description: none


Gene families : OG0001205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g26450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00157300 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Dcu_g08969 NUP96, PRE, SAR3, MOS3 nucleoporin of nuclear pore complex *(NUP98) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017553001 NUP96, PRE, SAR3, MOS3 Nuclear pore complex protein NUP96 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Ore_g22018 No alias nucleoporin of nuclear pore complex *(NUP98) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g117120.4.1 NUP96, PRE,... NUP96 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Tin_g15156 NUP96, PRE, SAR3, MOS3 nucleoporin of nuclear pore complex *(NUP98) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR021967 Nup98_C 635 916
IPR007230 Nup98_auto-Pept-S59_dom 46 192
No external refs found!