Dde_g26438 (ATRAB8D, ATRABE1B, RABE1b)

Aliases : ATRAB8D, ATRABE1B, RABE1b

Description : translation elongation factor *(EF-Tu) & original description: none

Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g26438
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
Adi_g056485	No alias	translation elongation factor *(EF-Tu) & original...	0.02	OrthoFinder output from all 47 species
Als_g08146	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.03	OrthoFinder output from all 47 species
Aop_g25435	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g06070	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.03	OrthoFinder output from all 47 species
Msp_g05929	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Nbi_g13791	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.03	OrthoFinder output from all 47 species
Tin_g03978	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e022880_P001	ATRAB8D,...	EF-Tu translation elongation factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016744	transketolase or transaldolase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004160	Transl_elong_EFTu/EF1A_C	379	478
IPR000795	T_Tr_GTP-bd_dom	81	282
IPR004161	EFTu-like_2	306	374

External Links

No external refs found!