1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g25330

Dde_g25330 (PUM1, APUM1)


Aliases : PUM1, APUM1

Description : not classified & original description: none


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g25330

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001065.15 PUM5, APUM5 No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01016507001 PUM1, APUM1 Pumilio homolog 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Pir_g01375 PUM1, APUM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g123980.4.1 PUM5, APUM5,... Pumilio homolog 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g005670.4.1 PUM3, APUM3,... Pumilio homolog 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 869 904
IPR001313 Pumilio_RNA-bd_rpt 907 937
IPR001313 Pumilio_RNA-bd_rpt 763 794
IPR001313 Pumilio_RNA-bd_rpt 797 830
IPR001313 Pumilio_RNA-bd_rpt 942 975
IPR001313 Pumilio_RNA-bd_rpt 988 1017
IPR001313 Pumilio_RNA-bd_rpt 839 864
IPR001313 Pumilio_RNA-bd_rpt 725 759
IPR012940 NABP 359 720
No external refs found!