Cpa|evm.model.tig00000786.1


Description : 28.99 DNA.unspecified DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0000624 (Gene family) Phylogenetic Tree(s): OG0000624_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00000786.1
Cluster HCCA cluster: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT1G48650 No alias DEA(D/H)-box RNA helicase family protein 0.01 Gene family
AT1G58060 No alias RNA helicase family protein 0.01 Gene family
AT5G04895 No alias DEA(D/H)-box RNA helicase family protein 0.02 Gene family
Cre12.g492450 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.01 Gene family
LOC_Os10g33275 Os10g0471350 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.02 Gene family
Smo177444 PACid_15404071 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.04 Gene family
Solyc01g006710.3.1 Solyc01g006710.3 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.01 Gene family
Solyc01g006970.3.1 Solyc01g006970.3 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.01 Gene family
Zm00001d032735 GRMZM2G399212 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.01 Gene family
Zm00001d034013 GRMZM5G802858 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 765 913
IPR007502 Helicase-assoc_dom 1225 1298
IPR011709 DUF1605 1410 1474
IPR001650 Helicase_C 1046 1161
No external refs found!