Dde_g25114


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g25114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23888 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30199 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G054500.1 CRR22, Ceric.15G054500 not classified & original description: pacid=50639954... 0.02 OrthoFinder output from all 47 species
Ceric.16G072300.1 Ceric.16G072300 not classified & original description: pacid=50590183... 0.03 OrthoFinder output from all 47 species
Ceric.36G012600.1 Ceric.36G012600 not classified & original description: pacid=50568766... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Dac_g05532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g63560.1 LOC_Os03g63560 OTP70 plastidial RNA splicing factor 0.02 OrthoFinder output from all 47 species
Lfl_g04822 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07412 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07418 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_237076g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.02 OrthoFinder output from all 47 species
Msp_g17020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22512 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55202 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g015370.1.1 Solyc09g015370 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Spa_g15050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23239 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016281_P001 LPA66, Zm00001e016281 Pentatricopeptide repeat-containing protein At3g62890... 0.04 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 218 246
IPR002885 Pentatricopeptide_repeat 289 310
IPR002885 Pentatricopeptide_repeat 188 209
IPR002885 Pentatricopeptide_repeat 542 584
IPR002885 Pentatricopeptide_repeat 315 361
IPR002885 Pentatricopeptide_repeat 419 464
No external refs found!