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Description : scaffold nucleoporin of nuclear pore complex *(NUP107) & original description: none
Gene families : OG0005850 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005850_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00267150 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058716 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP107) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g22743 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g28178 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP107) &... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g42420.1 | LOC_Os11g42420 | NUP107 scaffold nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g09527 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP107) &... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g23360.1 | No alias | NUP107 scaffold nucleoporin of nuclear pore complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16075 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP107) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g32299 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP107) &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo182361 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g049410.3.1 | Solyc12g049410 | NUP107 scaffold nucleoporin of nuclear pore complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e033550_P001 | Zm00001e033550 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005643 | nuclear pore | IEA | Interproscan |
| MF | GO:0017056 | structural constituent of nuclear pore | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007252 | Nup84/Nup107 | 191 | 860 |
| No external refs found! |