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  5. Dde_g24389

Dde_g24389


Description : not classified & original description: none


Gene families : OG0002549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g24389
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Aob_g23821 No alias regulatory factor *(RP8) of RNA polymerase RpoA activity... 0.03 OrthoFinder output from all 47 species
Aop_g05475 No alias regulatory factor *(RP8) of RNA polymerase RpoA activity... 0.03 OrthoFinder output from all 47 species
GSVIVT01006768001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp6g13740.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ppi_g12165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017048 No alias not classified & original description: CDS=50-1423 0.03 OrthoFinder output from all 47 species
Sam_g30268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo77953 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g091640.3.1 Solyc02g091640 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!