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  5. Dde_g24213

Dde_g24213


Description : not classified & original description: none


Gene families : OG0014958 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g24213
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Als_g18801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007444 No alias not classified & original description: CDS=1-3141 0.03 OrthoFinder output from all 47 species
Len_g07330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18893 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 683 705
IPR002885 Pentatricopeptide_repeat 585 610
IPR002885 Pentatricopeptide_repeat 280 302
IPR002885 Pentatricopeptide_repeat 210 233
IPR002885 Pentatricopeptide_repeat 612 639
IPR002885 Pentatricopeptide_repeat 511 541
IPR002885 Pentatricopeptide_repeat 306 352
IPR002885 Pentatricopeptide_repeat 913 961
IPR002885 Pentatricopeptide_repeat 408 454
IPR002885 Pentatricopeptide_repeat 811 859
IPR002885 Pentatricopeptide_repeat 710 757
No external refs found!