Dde_g23653 (RPD1)

Aliases : RPD1

Description : not classified & original description: none

Gene families : OG0004302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004302_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g23653

Target	Alias	Description	ECC score	Gene Family Method
AT1G06440	No alias	Ubiquitin carboxyl-terminal hydrolase family protein	0.02	OrthoFinder output from all 47 species
AT5G45790	No alias	Ubiquitin carboxyl-terminal hydrolase family protein	0.02	OrthoFinder output from all 47 species
Dac_g28796	RPD1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g00440	RPD1	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021099	PORR_domain	68	405

External Links

No external refs found!