Aliases : PDS3, PDS, PDE226
Description : phytoene desaturase *(PDS) & original description: none
Gene families : OG0006245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006245_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dde_g23615 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00131p00071060 | PDS3, PDS,... | Secondary metabolism.terpenoids.terpenoid... | 0.02 | OrthoFinder output from all 47 species | |
AT4G14210 | PDS3, PDS, PDE226 | phytoene desaturase 3 | 0.03 | OrthoFinder output from all 47 species | |
Ala_g09707 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0047.g030344 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: CDS=138-1889 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.08G066500.1 | PDS3, PDS,... | phytoene desaturase *(PDS) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
Cre12.g509650 | PDS3, PDS, PDE226 | Secondary metabolism.terpenoids.terpenoid... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os03g08570.1 | PDS3, PDS,... | phytoene desaturase (PDS) | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g01859 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Mp8g14330.1 | PDS3, PDS, PDE226 | phytoene desaturase (PDS) | 0.03 | OrthoFinder output from all 47 species | |
Pir_g10268 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g17790 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Spa_g01539 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02716 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004601 | peroxidase activity | IEP | HCCA |
MF | GO:0004602 | glutathione peroxidase activity | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
BP | GO:0017038 | protein import | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002937 | Amino_oxidase | 103 | 544 |
No external refs found! |