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  5. Dde_g23580

Dde_g23580


Description : not classified & original description: none


Gene families : OG0013744 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013744_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g23580

Target Alias Description ECC score Gene Family Method Actions
Aop_g31277 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.10G028400.1 Ceric.10G028400 not classified & original description: pacid=50612982... 0.04 OrthoFinder output from all 47 species
Msp_g47946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46372 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53286 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR046849 Eplus_motif 1253 1274
IPR002885 Pentatricopeptide_repeat 870 914
IPR002885 Pentatricopeptide_repeat 264 313
IPR002885 Pentatricopeptide_repeat 1072 1118
IPR002885 Pentatricopeptide_repeat 669 716
IPR002885 Pentatricopeptide_repeat 163 210
IPR002885 Pentatricopeptide_repeat 770 816
IPR002885 Pentatricopeptide_repeat 365 412
IPR002885 Pentatricopeptide_repeat 571 599
IPR002885 Pentatricopeptide_repeat 643 664
IPR002885 Pentatricopeptide_repeat 469 499
IPR002885 Pentatricopeptide_repeat 1146 1168
IPR002885 Pentatricopeptide_repeat 340 360
IPR002885 Pentatricopeptide_repeat 975 1001
IPR002885 Pentatricopeptide_repeat 844 865
IPR032867 DYW_dom 1286 1374
No external refs found!