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  5. Dde_g23374

Dde_g23374


Description : not classified & original description: none


Gene families : OG0014345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014345_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g23374
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Ala_g35881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 930 975
IPR002885 Pentatricopeptide_repeat 323 372
IPR002885 Pentatricopeptide_repeat 829 876
IPR002885 Pentatricopeptide_repeat 525 572
IPR002885 Pentatricopeptide_repeat 424 471
IPR002885 Pentatricopeptide_repeat 728 775
IPR002885 Pentatricopeptide_repeat 1054 1113
IPR002885 Pentatricopeptide_repeat 120 170
IPR002885 Pentatricopeptide_repeat 702 727
IPR002885 Pentatricopeptide_repeat 601 627
IPR002885 Pentatricopeptide_repeat 500 522
IPR002885 Pentatricopeptide_repeat 399 421
IPR002885 Pentatricopeptide_repeat 629 659
IPR002885 Pentatricopeptide_repeat 198 222
IPR002885 Pentatricopeptide_repeat 904 929
No external refs found!