Lfl_g18023 (SAG15, CLPD, ERD1)

Aliases : SAG15, CLPD, ERD1

Description : chaperone component *(ClpD) of chloroplast Clp-type protease complex & original description: none

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g18023

Target	Alias	Description	ECC score	Gene Family Method
AT2G25140	CLPB4, CLPB-M, HSP98.7	casein lytic proteinase B4	0.03	OrthoFinder output from all 47 species
Adi_g055207	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Als_g05102	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g20352	HSP93-V, DCA1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.30G013400.1	SAG15, CLPD,...	chaperone component *(ClpD) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
LOC_Os02g32520.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
LOC_Os12g12850.1	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Mp5g14810.1	SAG15, CLPD, ERD1	chaperone component ClpD of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Ppi_g43633	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004176	Clp_R_dom	143	190
IPR004176	Clp_R_dom	225	268
IPR019489	Clp_ATPase_C	896	974
IPR003959	ATPase_AAA_core	714	890
IPR003959	ATPase_AAA_core	355	494
IPR041546	ClpA/ClpB_AAA_lid	499	571

External Links

No external refs found!