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  5. Dde_g22584

Dde_g22584


Description : E3 ubiquitin ligase *(RIE1) & original description: none


Gene families : OG0001080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g22584
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Ceric.27G035500.1 Ceric.27G035500 E3 ubiquitin ligase *(RIE1) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01025848001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Msp_g12369 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g067280.1.1 Solyc02g067280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 334 376
No external refs found!