MA_10437228g0010


Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 19 (CNGC19)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10437228g0010
Cluster HCCA cluster: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.04 Gene family
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.06 Gene family
AT2G46440 CNGC11, ATCNGC11 cyclic nucleotide-gated channels 0.04 Gene family
AT2G46450 ATCNGC12, CNGC12 cyclic nucleotide-gated channel 12 0.02 Gene family
AT3G17690 CNGC19, ATCNGC19 cyclic nucleotide gated channel 19 0.03 Gene family
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.03 Gene family
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.02 Gene family
GSVIVT01027087001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
GSVIVT01029407001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os06g10580 Os06g0207700 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc03g098210.3.1 Solyc03g098210.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Solyc03g116850.3.1 Solyc03g116850.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.01 Gene family
Solyc05g050350.2.1 Solyc05g050350.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
Solyc05g050360.3.1 Solyc05g050360.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc05g050380.3.1 Solyc05g050380.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
Solyc07g005590.3.1 Solyc07g005590.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 40 148
No external refs found!