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  5. Dde_g21793

Dde_g21793 (RPL2)


Aliases : RPL2

Description : not classified & original description: none


Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g21793
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272570 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AMTR_s00543p00002030 RPL2.1,... 50S ribosomal protein L2, chloroplastic OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
ATCG00830 RPL2.1 ribosomal protein L2 0.06 OrthoFinder output from all 47 species
ATCG01310 RPL2.2 ribosomal protein L2 0.06 OrthoFinder output from all 47 species
Aev_g14432 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Aev_g24286 No alias component *(uL2m) of large mitoribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Ala_g18429 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Ala_g38158 No alias component *(uL2m) of large mitoribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Als_g02447 No alias component *(uL2m) of large mitoribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Aob_g13898 RPL2.1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g61267 No alias component *(uL2m) of large mitoribosomal-subunit... 0.19 OrthoFinder output from all 47 species
Cba_g03784 No alias component *(uL2m) of large mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cba_g04596 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.05G042700.1 RPL2.1, Ceric.05G042700 not classified & original description: pacid=50577724... 0.06 OrthoFinder output from all 47 species
Ceric.07G017400.1 RPL2.1, Ceric.07G017400 not classified & original description: pacid=50626616... 0.07 OrthoFinder output from all 47 species
Ceric.1Z020200.1 RPL2.1, Ceric.1Z020200 not classified & original description: pacid=50586367... 0.06 OrthoFinder output from all 47 species
Ceric.1Z164200.1 RPL2.1, Ceric.1Z164200 not classified & original description: pacid=50596959... 0.06 OrthoFinder output from all 47 species
Ceric.23G029300.1 Ceric.23G029300 not classified & original description: pacid=50611505... 0.04 OrthoFinder output from all 47 species
Ceric.38G009500.1 RPL2.1, Ceric.38G009500 not classified & original description: pacid=50580350... 0.09 OrthoFinder output from all 47 species
Ceric.38G057600.1 Ceric.38G057600 not classified & original description: pacid=50579815... 0.06 OrthoFinder output from all 47 species
Cre07.g348850 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Chara vulgaris 0.03 OrthoFinder output from all 47 species
Gb_17010 No alias component mtRPL2-C-terminal of large ribosomal subunit... 0.05 OrthoFinder output from all 47 species
Len_g13282 No alias component *(uL2m) of large mitoribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Lfl_g13189 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Lfl_g32423 No alias component *(uL2m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Mp1g19370.1 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Msp_g00265 No alias component *(uL2m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Nbi_g04996 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Nbi_g39693 No alias component *(uL2m) of large mitoribosomal-subunit... 0.13 OrthoFinder output from all 47 species
Ore_g43250 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Pir_g37334 No alias component *(uL2m) of large mitoribosomal-subunit... 0.17 OrthoFinder output from all 47 species
Sam_g03873 No alias component *(uL2m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Smo137825 RPL2.1 Protein biosynthesis.organelle translation... 0.11 OrthoFinder output from all 47 species
Spa_g56424 RPL2 component *(uL2m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g21720 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e040590_P001 RPL2.1, Zm00001e040590 50S ribosomal protein L2, chloroplastic OS=Dioscorea... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 181 270
No external refs found!