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  5. Dde_g21687

Dde_g21687


Description : not classified & original description: none


Gene families : OG0007491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g21687

Target Alias Description ECC score Gene Family Method Actions
Adi_g105487 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g117153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03588 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05627 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024762 OTP84 not classified & original description: CDS=238-3549 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g043991 OTP84 not classified & original description: CDS=230-3472 0.04 OrthoFinder output from all 47 species
Cba_g13501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G004500.1 Ceric.02G004500 not classified & original description: pacid=50584632... 0.07 OrthoFinder output from all 47 species
Ceric.15G002000.1 Ceric.15G002000 not classified & original description: pacid=50640344... 0.05 OrthoFinder output from all 47 species
Ceric.17G084700.1 Ceric.17G084700 not classified & original description: pacid=50618199... 0.06 OrthoFinder output from all 47 species
Dac_g10625 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22749 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009384 No alias not classified & original description: CDS=123-3881 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0234.g026528 No alias not classified & original description: CDS=213-3461 0.03 OrthoFinder output from all 47 species
Sam_g08396 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g09082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15754 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g21963 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 361 408
IPR002885 Pentatricopeptide_repeat 764 812
IPR002885 Pentatricopeptide_repeat 568 610
IPR032867 DYW_dom 1069 1149
IPR002885 Pentatricopeptide_repeat 262 288
IPR002885 Pentatricopeptide_repeat 464 488
IPR002885 Pentatricopeptide_repeat 739 759
IPR002885 Pentatricopeptide_repeat 901 926
IPR002885 Pentatricopeptide_repeat 669 695
No external refs found!