1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g21511

Dde_g21511


Description : not classified & original description: none


Gene families : OG0012411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012411_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g21511
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Ala_g11362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 74 95
IPR002885 Pentatricopeptide_repeat 580 606
IPR002885 Pentatricopeptide_repeat 275 300
IPR002885 Pentatricopeptide_repeat 784 808
IPR002885 Pentatricopeptide_repeat 712 739
IPR002885 Pentatricopeptide_repeat 377 400
IPR002885 Pentatricopeptide_repeat 403 450
IPR002885 Pentatricopeptide_repeat 99 146
IPR002885 Pentatricopeptide_repeat 302 349
IPR002885 Pentatricopeptide_repeat 201 248
IPR046848 E_motif 828 866
No external refs found!