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  5. Dde_g21450

Dde_g21450


Description : component *(eS8) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000906_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g21450

Target Alias Description ECC score Gene Family Method Actions
Ala_g00910 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g57044 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
MA_10436736g0010 No alias 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_14571g0010 No alias component RPS8 of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_9738483g0010 No alias component RPS8 of SSU proteome 0.04 OrthoFinder output from all 47 species
Ppi_g16148 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g06814 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc07g065170.3.1 Solyc07g065170 component RPS8 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc10g006070.3.1 Solyc10g006070 component RPS8 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g47973 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 53 246
No external refs found!