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  5. Dde_g21301

Dde_g21301 (ATPMEPCRF, PMEPCRF)


Aliases : ATPMEPCRF, PMEPCRF

Description : EC_3.1 hydrolase acting on ester bond & original description: none


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g21301
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT3G06830 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT5G20860 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT5G64640 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
Als_g35709 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10954.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Azfi_s1434.g103081 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g15947 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04854 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27414 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01012639001 ATPMEPCRA, PMEPCRA Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_36012 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os04g38560.1 LOC_Os04g38560 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os07g49100.1 LOC_Os07g49100 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_74624g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_84680g0010 ATPME2, PME2 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Nbi_g13298 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Nbi_g19794 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Solyc01g099940.3.1 Solyc01g099940 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc02g014300.2.1 Solyc02g014300 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc03g083870.4.1 Solyc03g083870 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc07g064170.3.1 ATPMEPCRA,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc07g064180.4.1 ATPMEPCRA,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e035838_P001 Zm00001e035838 pectin methylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 77 226
IPR000070 Pectinesterase_cat 288 583
No external refs found!