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  5. Dde_g20963

Dde_g20963 (CLO, GFA1, MEE5)


Aliases : CLO, GFA1, MEE5

Description : component *(CLO/SNU114/MAC11) of MAC spliceosome-associated complex & original description: none


Gene families : OG0005717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g20963

Target Alias Description ECC score Gene Family Method Actions
AT1G06220 CLO, GFA1, MEE5 Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 OrthoFinder output from all 47 species
Ala_g13456 CLO, GFA1, MEE5 component *(CLO/SNU114/MAC11) of MAC... 0.04 OrthoFinder output from all 47 species
Cre17.g737250 CLO, GFA1, MEE5 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Nbi_g03155 CLO, GFA1, MEE5 component *(CLO/SNU114/MAC11) of MAC... 0.03 OrthoFinder output from all 47 species
Spa_g01974 CLO, GFA1, MEE5 component *(CLO/SNU114/MAC11) of MAC... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR005517 Transl_elong_EFG/EF2_IV 733 849
IPR000640 EFG_V-like 852 940
IPR004161 EFTu-like_2 518 592
IPR000795 T_Tr_GTP-bd_dom 152 356
IPR031950 EFTUD2_N 4 128
No external refs found!