1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g17843

Lfl_g17843


Description : component *(PsbX) of PS-II complex & original description: none


Gene families : OG0002177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g17843

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00218080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.02 OrthoFinder output from all 47 species
AT2G06520 PSBX photosystem II subunit X 0.03 OrthoFinder output from all 47 species
Ala_g10239 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27184 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55668 No alias component *(PsbX) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Als_g55991 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17096 No alias component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g31006 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Gb_07296 PSBX component PsbX of PS-II complex 0.03 OrthoFinder output from all 47 species
LOC_Os07g47640.1 PSBX, LOC_Os07g47640 component PsbX of PS-II complex 0.02 OrthoFinder output from all 47 species
Lfl_g15877 No alias component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
MA_59693g0010 PSBX component PsbX of PS-II complex 0.02 OrthoFinder output from all 47 species
Pnu_g30737 No alias component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c5_17290V3.1 PSBX, Pp3c5_17290 photosystem II subunit X 0.02 OrthoFinder output from all 47 species
Ppi_g20878 No alias component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025856_P001 PSBX, Zm00001e025856 component PsbX of PS-II complex 0.04 OrthoFinder output from all 47 species
Zm00001e035834_P001 PSBX, Zm00001e035834 component PsbX of PS-II complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 71 107
No external refs found!