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  5. Dde_g19724

Dde_g19724 (ATUPF3, UPF3)


Aliases : ATUPF3, UPF3

Description : component *(UPF3) of RNA quality control Exon Junction complex & original description: none


Gene families : OG0002175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002175_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Dde_g19724

Target Alias Description ECC score Gene Family Method Actions
Aev_g11732 ATUPF3, UPF3 component *(UPF3) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Aev_g21603 ATUPF3, UPF3 component *(UPF3) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Aob_g35424 ATUPF3, UPF3 component *(UPF3) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04063.t2 ATUPF3, UPF3,... component *(UPF3) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Cba_g38478 ATUPF3, UPF3 component *(UPF3) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Tin_g12324 ATUPF3, UPF3 component *(UPF3) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Zm00001e008047_P001 ATUPF3, UPF3,... component UPF3 of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR005120 UPF3_dom 138 303
No external refs found!