Dde_g19602


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g19602

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00155170 CRR2,... Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00220350 OTP85,... Pentatricopeptide repeat-containing protein At2g02980,... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
Adi_g003354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g089097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06301 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07468 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g25768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60846 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42153 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62402 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01199.t1 OTP86, Aspi01Gene01199 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05589.t1 CRK8, Aspi01Gene05589 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19894.t1 Aspi01Gene19894 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44451.t2 Aspi01Gene44451 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62647.t1 Aspi01Gene62647 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65088.t1 Aspi01Gene65088 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65182.t1 OTP86, Aspi01Gene65182 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65777.t1 Aspi01Gene65777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66061.t2 Aspi01Gene66061 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70790.t1 Aspi01Gene70790 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000688 No alias not classified & original description: CDS=1-3246 0.05 OrthoFinder output from all 47 species
Azfi_s0074.g037480 OTP82 not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Azfi_s0115.g046284 No alias not classified & original description: CDS=76-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0126.g048645 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Azfi_s0256.g060514 No alias RecA-activity modulator *(RecX) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.02 OrthoFinder output from all 47 species
Ceric.28G069900.1 Ceric.28G069900 not classified & original description: pacid=50570610... 0.03 OrthoFinder output from all 47 species
Dac_g22525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16948 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40966 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g37997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72049.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Len_g18325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14968 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18756 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11574 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g16519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31933 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03894 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18893 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001330 No alias not classified & original description: CDS=1-3081 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009681 No alias not classified & original description: CDS=1-2907 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015411 No alias not classified & original description: CDS=1-3726 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015571 No alias not classified & original description: CDS=1-1581 0.03 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Spa_g18513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28951 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07560 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 382 408
IPR002885 Pentatricopeptide_repeat 349 370
IPR002885 Pentatricopeptide_repeat 74 103
IPR002885 Pentatricopeptide_repeat 148 168
IPR002885 Pentatricopeptide_repeat 652 677
IPR002885 Pentatricopeptide_repeat 176 204
IPR002885 Pentatricopeptide_repeat 248 273
IPR002885 Pentatricopeptide_repeat 278 305
IPR002885 Pentatricopeptide_repeat 448 471
IPR002885 Pentatricopeptide_repeat 578 626
IPR002885 Pentatricopeptide_repeat 476 524
No external refs found!