Dde_g18670 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0013460 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0013460_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g18670
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Adi_g003221 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Ceric.22G072200.1 Ceric.22G072200 not classified & original description: pacid=50614353... 0.01 OrthoFinder output from all 39 species
Dac_g36042 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Len_g44151 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g22008 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Msp_g41395 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g02826 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 489 537
IPR002885 Pentatricopeptide_repeat 387 434
IPR002885 Pentatricopeptide_repeat 284 331
IPR002885 Pentatricopeptide_repeat 183 229
IPR002885 Pentatricopeptide_repeat 157 179
IPR002885 Pentatricopeptide_repeat 259 281
IPR002885 Pentatricopeptide_repeat 361 385
IPR002885 Pentatricopeptide_repeat 566 588
No external refs found!