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  5. Lfl_g17624

Lfl_g17624


Description : not classified & original description: none


Gene families : OG0004202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g17624
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Adi_g012829 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27110.t1 Aspi01Gene27110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G003100.1 Ceric.23G003100 not classified & original description: pacid=50610792... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.7 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g33123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01038634001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_36151 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36153 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g50690.1 LOC_Os01g50690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2296g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g15580.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g12796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011767_P002 Zm00001e011767 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 600 629
IPR001680 WD40_repeat 469 521
IPR024761 TFIIIC_delta_N 103 251
IPR024764 TFIIIC_Znf 933 1023
No external refs found!