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  5. Lfl_g17612

Lfl_g17612 (ATSDAT, TDT, ATTDT)


Aliases : ATSDAT, TDT, ATTDT

Description : di-/tricarboxylate transporter *(TDT) & original description: none


Gene families : OG0002015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g17612

Target Alias Description ECC score Gene Family Method Actions
Adi_g082045 ATSDAT, TDT, ATTDT di-/tricarboxylate transporter *(TDT) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene59105.t1 ATSDAT, TDT,... di-/tricarboxylate transporter *(TDT) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene59111.t1 ATSDAT, TDT,... di-/tricarboxylate transporter *(TDT) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06787 ATSDAT, TDT, ATTDT di-/tricarboxylate transporter *(TDT) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os08g39370.1 ATSDAT, TDT,... di-/tricarboxylate transporter (TDT) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31130.1 ATSDAT, TDT,... di-/tricarboxylate transporter (TDT) 0.03 OrthoFinder output from all 47 species
Len_g19158 ATSDAT, TDT, ATTDT di-/tricarboxylate transporter *(TDT) & original... 0.03 OrthoFinder output from all 47 species
Msp_g10180 ATSDAT, TDT, ATTDT di-/tricarboxylate transporter *(TDT) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g28172 ATSDAT, TDT, ATTDT di-/tricarboxylate transporter *(TDT) & original... 0.04 OrthoFinder output from all 47 species
Sam_g33987 No alias di-/tricarboxylate transporter *(TDT) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0003796 lysozyme activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001898 SLC13A/DASS 59 658
No external refs found!