Lfl_g17561 (CTF2A)

Aliases : CTF2A

Description : not classified & original description: none

Gene families : OG0000601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000601_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g17561

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00248080	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00001p00248220	evm_27.TU.AmTr_v1...	Monooxygenase 2 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT2G29720	CTF2B	FAD/NAD(P)-binding oxidoreductase family protein	0.04	OrthoFinder output from all 47 species
AT4G15765	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.04	OrthoFinder output from all 47 species
AT4G38540	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.04	OrthoFinder output from all 47 species
AT5G05320	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.02	OrthoFinder output from all 47 species
Ala_g16813	CTF2B	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g21249	CTF2A	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g32270	CTF2A	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g11616	CTF2A	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene54116.t1	CTF2A, Aspi01Gene54116	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene68213.t1	CTF2A, Aspi01Gene68213	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008760001	No alias	Monooxygenase 2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01026621001	No alias	Monooxygenase 2 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01026626001	No alias	Monooxygenase 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
LOC_Os03g05840.1	LOC_Os03g05840	Monooxygenase 2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os03g05880.1	LOC_Os03g05880	Monooxygenase 2 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os03g05910.1	LOC_Os03g05910	Monooxygenase 2 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
LOC_Os04g34580.1	CTF2A, LOC_Os04g34580	Monooxygenase 2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Len_g12950	CTF2A	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g17517	CTF2A	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g24543	CTF2B	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g17228	CTF2A	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g29498	CTF2A	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10427607g0010	No alias	Monooxygenase 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_13849g0010	No alias	Monooxygenase 3 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_408078g0010	No alias	Monooxygenase 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp1g27880.1	CTF2A	Monooxygenase 3 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Pir_g35930	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc08g078040.4.1	CTF2A, Solyc08g078040	Monooxygenase 2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc12g013690.2.1	Solyc12g013690	Monooxygenase 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e038996_P001	Zm00001e038996	Monooxygenase 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e040868_P001	Zm00001e040868	Monooxygenase 2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	None	Extended
MF	GO:0004506	squalene monooxygenase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013698	Squalene_epoxidase	13	109

External Links

No external refs found!

Lfl_g17561 (CTF2A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation