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Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00235510 | OTP84,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G49740 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G02750 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G14050 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G18750 | DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G03800 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G06540 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G39350 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036772 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g099164 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07887 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g26323 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28682 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G085300.1 | Ceric.11G085300 | not classified & original description: pacid=50596385... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G003900.1 | Ceric.19G003900 | not classified & original description: pacid=50575192... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G059700.1 | CRR22, Ceric.23G059700 | not classified & original description: pacid=50609689... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G067100.1 | CRR22, Ceric.27G067100 | not classified & original description: pacid=50605115... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G026600.1 | CRR22, Ceric.31G026600 | not classified & original description: pacid=50574263... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g02368 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05509 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g18413 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g18428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06366 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06472 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08263 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16678 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g23638 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47921 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g49092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16405 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26396 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030836001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g62910.1 | CRR2, LOC_Os01g62910 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04722 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04830 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13061 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18973 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g55833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05629 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18616 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g09805 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11358 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28529 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g04969 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06876 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g11764 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02540 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63901 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05345 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07011 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g07521 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g18809 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18927 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g22128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g41988 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53028 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53946 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g60243 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002209 | No alias | not classified & original description: CDS=347-2416 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007167 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-3162 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017091 | No alias | not classified & original description: CDS=1-3111 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08034 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37180 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g094480.4.1 | Solyc02g094480 | RNA editing factor (MEF14) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g007430.1.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g090440.1.1 | LPA66, Solyc09g090440 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23504 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g39673 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30403 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030887_P001 | Zm00001e030887 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 254 | 278 |
| IPR002885 | Pentatricopeptide_repeat | 152 | 174 |
| IPR002885 | Pentatricopeptide_repeat | 180 | 210 |
| IPR002885 | Pentatricopeptide_repeat | 356 | 379 |
| IPR002885 | Pentatricopeptide_repeat | 458 | 483 |
| IPR002885 | Pentatricopeptide_repeat | 558 | 582 |
| IPR002885 | Pentatricopeptide_repeat | 484 | 531 |
| IPR002885 | Pentatricopeptide_repeat | 280 | 326 |
| IPR002885 | Pentatricopeptide_repeat | 382 | 428 |
| IPR002885 | Pentatricopeptide_repeat | 76 | 122 |
| No external refs found! |