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  5. Dde_g17301

Dde_g17301 (HVA22F)


Aliases : HVA22F

Description : not classified & original description: none


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g17301
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT5G62490 ATHVA22B, HVA22B HVA22 homologue B 0.03 OrthoFinder output from all 47 species
MA_119472g0010 HVA22E, ATHVA22E Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 152.0) 0.02 OrthoFinder output from all 47 species
Msp_g09973 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37973 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37188 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04615 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03743 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g014420.4.1 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 117.0) 0.02 OrthoFinder output from all 47 species
Solyc06g072680.4.1 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 148.0) 0.04 OrthoFinder output from all 47 species
Solyc11g010930.2.1 HVA22E,... HVA22-like protein d OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e036118_P003 ATHVA22A,... HVA22-like protein a OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 71 145
No external refs found!