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  5. Dde_g16727

Dde_g16727 (ARF16)


Aliases : ARF16

Description : ARF-type transcription factor & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g16727

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00078220 ARF21,... Putative auxin response factor 21 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aspi01Gene02982.t1 ARF6, Aspi01Gene02982 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24129.t1 ARF19, IAA22,... ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035204001 ARF8, ATARF8 RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
GSVIVT01035205001 ARF8, ATARF8 Auxin response factor 12 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
Ore_g10460 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012712 ARF6 ARF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR010525 ARF_dom 283 366
IPR003340 B3_DNA-bd 121 222
No external refs found!