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  5. Dde_g16648

Dde_g16648 (EMB2654)


Aliases : EMB2654

Description : trans-splicing factor *(EMB2654) & original description: none


Gene families : OG0007336 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g16648
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Ppi_g48560 EMB2654 trans-splicing factor *(EMB2654) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 190 231
IPR002885 Pentatricopeptide_repeat 583 622
IPR002885 Pentatricopeptide_repeat 436 484
IPR002885 Pentatricopeptide_repeat 366 415
IPR002885 Pentatricopeptide_repeat 159 188
IPR002885 Pentatricopeptide_repeat 649 669
IPR033443 PPR_long 687 833
IPR002885 Pentatricopeptide_repeat 495 551
IPR002885 Pentatricopeptide_repeat 286 344
No external refs found!