Dde_g16279 (RPS4)

Aliases : RPS4

Description : not classified & original description: none

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g16279

Target	Alias	Description	ECC score	Gene Family Method
Ala_g19011	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g32229	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aob_g27334	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene34778.t1	Aspi01Gene34778	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene45500.t1	LAZ5, Aspi01Gene45500	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene48759.t1	Aspi01Gene48759	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene48836.t1	Aspi01Gene48836	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g51799	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g51888	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_397657g0020	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Pir_g26936	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Pp3c10_20790V3.1	Pp3c10_20790	disease resistance protein (TIR-NBS-LRR class)	0.02	OrthoFinder output from all 47 species
Pp3c10_4170V3.1	Pp3c10_4170	disease resistance protein (TIR-NBS-LRR class) family	0.01	OrthoFinder output from all 47 species
Pp3c20_22230V3.1	Pp3c20_22230	Disease resistance protein (TIR-NBS-LRR class) family	0.01	OrthoFinder output from all 47 species
Pp3c4_30410V3.1	Pp3c4_30410	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	3	119

External Links

No external refs found!

Dde_g16279 (RPS4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation