Dde_g15886


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g15886

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00031420 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
AMTR_s00098p00167700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g50390,... 0.04 OrthoFinder output from all 47 species
AMTR_s00126p00080460 OTP82,... Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Adi_g007782 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05438 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34145 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g19914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06903 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30469 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25584 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene01267.t1 CRR2, Aspi01Gene01267 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03711.t1 Aspi01Gene03711 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09926.t1 CRR22, Aspi01Gene09926 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23907.t1 Aspi01Gene23907 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56965.t1 Aspi01Gene56965 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G047600.1 Ceric.04G047600 not classified & original description: pacid=50632074... 0.04 OrthoFinder output from all 47 species
Ceric.04G079600.1 OTP84, Ceric.04G079600 not classified & original description: pacid=50631214... 0.04 OrthoFinder output from all 47 species
Ceric.27G070400.1 CRR22, Ceric.27G070400 not classified & original description: pacid=50605716... 0.03 OrthoFinder output from all 47 species
Dac_g15084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35442 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37168 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09826 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036207001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Len_g42874 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05475 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.06 OrthoFinder output from all 47 species
Pir_g16422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03152 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15474 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005124 No alias not classified & original description: CDS=63-833 0.06 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16371 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06501 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18446 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49347 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17155 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 249 271
IPR002885 Pentatricopeptide_repeat 172 220
IPR002885 Pentatricopeptide_repeat 71 117
IPR002885 Pentatricopeptide_repeat 275 321
IPR002885 Pentatricopeptide_repeat 376 423
No external refs found!