MA_10436772g0010


Description : 1.3.13 PS.calvin cycle.rubisco interacting Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. chaperonin-60alpha (CPN60A)


Gene families : OG_01_0000305 (Gene family) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10436772g0010
Cluster HCCA cluster: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT2G33210 HSP60-2 heat shock protein 60-2 0.03 Gene family
AT5G18820 EMB3007 TCP-1/cpn60 chaperonin family protein 0.03 Gene family
Cpa|evm.model.tig00001269.7 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.01 Gene family
Cre06.g309100 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.02 Gene family
GSVIVT01016859001 No alias 29.6 protein.folding heat shock protein 60-3A (HSP60-3A) 0.03 Gene family
GSVIVT01017032001 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.03 Gene family
LOC_Os02g01280 Os02g0102900 No description available 0.02 Gene family
LOC_Os03g04970 Os03g0143400 29.6 protein.folding mitochondrial chaperonin HSP.... 0.02 Gene family
LOC_Os03g64210 Os03g0859600,... 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.02 Gene family
LOC_Os05g46290 Os05g0540300 29.6 protein.folding heat shock protein 60-3A (HSP60-3A) 0.04 Gene family
LOC_Os09g38980 Os09g0563300 29.6 protein.folding embryo defective 3007 (EMB3007) 0.02 Gene family
Smo168153 PACid_15419933 No description available 0.02 Gene family
Solyc02g068730.3.1 Solyc02g068730.3 29.6 protein.folding embryo defective 3007 (EMB3007) 0.03 Gene family
Solyc05g053470.3.1 Solyc05g053470.3 29.6 protein.folding mitochondrial chaperonin HSP.... 0.04 Gene family
Zm00001d028409 GRMZM2G042253 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.02 Gene family
Zm00001d034919 GRMZM2G434173 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.02 Gene family
Zm00001d035937 GRMZM2G095252,... No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 81 538
No external refs found!