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  5. Dde_g15071

Dde_g15071


Description : protein involved in PS-II assembly *(HCF244) & original description: none


Gene families : OG0005073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g15071
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00228610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AT4G35250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g083362 No alias protein involved in PS-II assembly *(HCF244) & original... 0.03 OrthoFinder output from all 47 species
Ala_g14214 No alias protein involved in PS-II assembly *(HCF244) & original... 0.06 OrthoFinder output from all 47 species
Aob_g08922 No alias protein involved in PS-II assembly *(HCF244) & original... 0.03 OrthoFinder output from all 47 species
Cba_g00840 No alias protein involved in PS-II assembly *(HCF244) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G004000.1 Ceric.07G004000 protein involved in PS-II assembly *(HCF244) & original... 0.08 OrthoFinder output from all 47 species
Cre02.g142146 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dcu_g02684 No alias protein involved in PS-II assembly *(HCF244) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g32101 No alias protein involved in PS-II assembly *(HCF244) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01023933001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Gb_20261 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g44000.1 LOC_Os08g44000 HCF244 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Len_g09839 No alias protein involved in PS-II assembly *(HCF244) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g02979 No alias protein involved in PS-II assembly *(HCF244) & original... 0.03 OrthoFinder output from all 47 species
MA_10432153g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g06810.1 No alias HCF244 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Nbi_g12400 No alias protein involved in PS-II assembly *(HCF244) & original... 0.08 OrthoFinder output from all 47 species
Ore_g03288 No alias protein involved in PS-II assembly *(HCF244) & original... 0.03 OrthoFinder output from all 47 species
Pir_g14964 No alias protein involved in PS-II assembly *(HCF244) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13694 No alias protein involved in PS-II assembly *(HCF244) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017156 No alias protein involved in PS-II assembly *(HCF244) & original... 0.04 OrthoFinder output from all 47 species
Sam_g18478 No alias protein involved in PS-II assembly *(HCF244) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g112060.4.1 Solyc01g112060 HCF244 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Tin_g05090 No alias protein involved in PS-II assembly *(HCF244) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003972_P002 Zm00001e003972 HCF244 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR008030 NmrA-like 96 318
No external refs found!